Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RetP35546 Gm24158-201ENSMUST00000175263 71 ntBASIC13.66□□□□□ -0.22
RetP35546 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
RetP35546 Gm27622-201ENSMUST00000183779 60 ntBASIC13.66□□□□□ -0.22
RetP35546 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Gm20553-201ENSMUST00000204205 844 ntBASIC13.66□□□□□ -0.22
RetP35546 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RetP35546 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RetP35546 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
RetP35546 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RetP35546 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RetP35546 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
RetP35546 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Gm12428-201ENSMUST00000119844 727 ntBASIC13.65□□□□□ -0.22
RetP35546 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.65□□□□□ -0.22
RetP35546 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.65□□□□□ -0.22
RetP35546 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.65□□□□□ -0.22
RetP35546 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.65□□□□□ -0.22
RetP35546 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.65□□□□□ -0.22
RetP35546 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RetP35546 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
RetP35546 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RetP35546 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RetP35546 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RetP35546 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RetP35546 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RetP35546 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RetP35546 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Gm23547-201ENSMUST00000158210 271 ntBASIC13.64□□□□□ -0.23
RetP35546 Rpph1-201ENSMUST00000175096 319 ntBASIC13.64□□□□□ -0.23
RetP35546 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RetP35546 Gm43438-201ENSMUST00000198133 379 ntBASIC13.64□□□□□ -0.23
RetP35546 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC13.64□□□□□ -0.23
RetP35546 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RetP35546 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.64□□□□□ -0.23
RetP35546 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.64□□□□□ -0.23
RetP35546 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RetP35546 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.64□□□□□ -0.23
RetP35546 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RetP35546 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
RetP35546 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RetP35546 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RetP35546 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
RetP35546 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RetP35546 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RetP35546 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.63□□□□□ -0.23
RetP35546 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RetP35546 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RetP35546 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 76.4 ms