Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Nedd8P29595 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.49□□□□□ -0.25
Nedd8P29595 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.49□□□□□ -0.25
Nedd8P29595 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Nedd8P29595 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Nedd8P29595 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Nedd8P29595 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Gm1818-201ENSMUST00000169406 1184 ntBASIC13.48□□□□□ -0.25
Nedd8P29595 Mir5122-201ENSMUST00000175004 89 ntBASIC13.48□□□□□ -0.25
Nedd8P29595 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.48□□□□□ -0.25
Nedd8P29595 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Nedd8P29595 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
Nedd8P29595 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nedd8P29595 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nedd8P29595 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nedd8P29595 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Nedd8P29595 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Nedd8P29595 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nedd8P29595 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.47□□□□□ -0.25
Nedd8P29595 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC13.47□□□□□ -0.25
Nedd8P29595 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.47□□□□□ -0.25
Nedd8P29595 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.47□□□□□ -0.25
Nedd8P29595 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Nedd8P29595 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.47□□□□□ -0.25
Nedd8P29595 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nedd8P29595 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Nedd8P29595 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nedd8P29595 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nedd8P29595 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.25
Nedd8P29595 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.46□□□□□ -0.25
Nedd8P29595 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.46□□□□□ -0.25
Nedd8P29595 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nedd8P29595 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nedd8P29595 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nedd8P29595 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.46□□□□□ -0.25
Nedd8P29595 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.46□□□□□ -0.25
Nedd8P29595 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Nedd8P29595 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC13.46□□□□□ -0.25
Nedd8P29595 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.46□□□□□ -0.25
Nedd8P29595 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Nedd8P29595 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nedd8P29595 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.46□□□□□ -0.26
Nedd8P29595 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms