Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.68■□□□□ 0.26
Vcam1P29533 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.68■□□□□ 0.26
Vcam1P29533 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.68■□□□□ 0.26
Vcam1P29533 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.68■□□□□ 0.26
Vcam1P29533 Gm6745-201ENSMUST00000199216 526 ntBASIC16.68■□□□□ 0.26
Vcam1P29533 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.68■□□□□ 0.26
Vcam1P29533 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.68■□□□□ 0.26
Vcam1P29533 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.68■□□□□ 0.26
Vcam1P29533 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Vcam1P29533 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Vcam1P29533 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.67■□□□□ 0.26
Vcam1P29533 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vcam1P29533 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Gm12138-201ENSMUST00000122180 951 ntBASIC16.67■□□□□ 0.26
Vcam1P29533 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC16.67■□□□□ 0.26
Vcam1P29533 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Vcam1P29533 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Vcam1P29533 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.67■□□□□ 0.26
Vcam1P29533 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vcam1P29533 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Vcam1P29533 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC16.67■□□□□ 0.26
Vcam1P29533 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Vcam1P29533 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Vcam1P29533 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Vcam1P29533 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Vcam1P29533 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC16.66■□□□□ 0.26
Vcam1P29533 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Vcam1P29533 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.66■□□□□ 0.26
Vcam1P29533 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.66■□□□□ 0.26
Vcam1P29533 Gm37917-201ENSMUST00000194711 392 ntBASIC16.66■□□□□ 0.26
Vcam1P29533 Gm8515-201ENSMUST00000194852 576 ntBASIC16.66■□□□□ 0.26
Vcam1P29533 AC165157.4-201ENSMUST00000220587 139 ntBASIC16.66■□□□□ 0.26
Vcam1P29533 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC16.66■□□□□ 0.26
Vcam1P29533 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Gm15823-201ENSMUST00000064305 670 ntBASIC16.66■□□□□ 0.26
Vcam1P29533 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.66■□□□□ 0.26
Vcam1P29533 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Vcam1P29533 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vcam1P29533 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vcam1P29533 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vcam1P29533 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Vcam1P29533 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.65■□□□□ 0.26
Vcam1P29533 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Vcam1P29533 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.65■□□□□ 0.26
Vcam1P29533 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Vcam1P29533 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.65■□□□□ 0.26
Vcam1P29533 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.65■□□□□ 0.26
Vcam1P29533 Gm18018-201ENSMUST00000198273 408 ntBASIC16.65■□□□□ 0.26
Vcam1P29533 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.65■□□□□ 0.26
Vcam1P29533 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC16.65■□□□□ 0.26
Vcam1P29533 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Gm18624-201ENSMUST00000220966 658 ntBASIC16.65■□□□□ 0.26
Vcam1P29533 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.65■□□□□ 0.26
Vcam1P29533 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vcam1P29533 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vcam1P29533 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms