Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cd40lgP27548 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Cd40lgP27548 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.46□□□□□ -0.25
Cd40lgP27548 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Cd40lgP27548 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Cd40lgP27548 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.46□□□□□ -0.25
Cd40lgP27548 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Cd40lgP27548 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cd40lgP27548 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cd40lgP27548 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cd40lgP27548 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cd40lgP27548 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.46□□□□□ -0.26
Cd40lgP27548 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Cd40lgP27548 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Cd40lgP27548 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Cd40lgP27548 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.45□□□□□ -0.26
Cd40lgP27548 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Cd40lgP27548 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Gm15427-201ENSMUST00000117288 531 ntBASIC13.45□□□□□ -0.26
Cd40lgP27548 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.45□□□□□ -0.26
Cd40lgP27548 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.45□□□□□ -0.26
Cd40lgP27548 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.45□□□□□ -0.26
Cd40lgP27548 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.45□□□□□ -0.26
Cd40lgP27548 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.45□□□□□ -0.26
Cd40lgP27548 Gm10175-201ENSMUST00000086013 645 ntBASIC13.45□□□□□ -0.26
Cd40lgP27548 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Cd40lgP27548 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.45□□□□□ -0.26
Cd40lgP27548 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.45□□□□□ -0.26
Cd40lgP27548 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.45□□□□□ -0.26
Cd40lgP27548 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Cd40lgP27548 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Cd40lgP27548 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Mir1895-201ENSMUST00000122615 79 ntBASIC13.44□□□□□ -0.26
Cd40lgP27548 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.44□□□□□ -0.26
Cd40lgP27548 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Cd40lgP27548 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Cd40lgP27548 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms