Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Cbx3P23198 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cbx3P23198 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cbx3P23198 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.31□□□□□ -0.28
Cbx3P23198 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Cbx3P23198 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cbx3P23198 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.3□□□□□ -0.28
Cbx3P23198 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.3□□□□□ -0.28
Cbx3P23198 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cbx3P23198 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cbx3P23198 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.3□□□□□ -0.28
Cbx3P23198 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC13.3□□□□□ -0.28
Cbx3P23198 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 AC164426.2-201ENSMUST00000225993 2492 ntBASIC13.3□□□□□ -0.28
Cbx3P23198 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cbx3P23198 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
Cbx3P23198 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cbx3P23198 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Cbx3P23198 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.29□□□□□ -0.28
Cbx3P23198 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Gm13559-201ENSMUST00000120476 863 ntBASIC13.29□□□□□ -0.28
Cbx3P23198 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.29□□□□□ -0.28
Cbx3P23198 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.29□□□□□ -0.28
Cbx3P23198 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.29□□□□□ -0.28
Cbx3P23198 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Gm45058-201ENSMUST00000205810 766 ntBASIC13.29□□□□□ -0.28
Cbx3P23198 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cbx3P23198 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cbx3P23198 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.29□□□□□ -0.28
Cbx3P23198 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.29□□□□□ -0.28
Cbx3P23198 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cbx3P23198 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cbx3P23198 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Cbx3P23198 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cbx3P23198 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.28□□□□□ -0.28
Cbx3P23198 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
Cbx3P23198 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cbx3P23198 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cbx3P23198 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms