Protein–RNA interactions for Protein: P22227

Zfp42, Zinc finger protein 42, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp42P22227 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zfp42P22227 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zfp42P22227 Rubie-203ENSMUST00000227803 2430 ntBASIC15.34■□□□□ 0.05
Zfp42P22227 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Zfp42P22227 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zfp42P22227 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Zfp42P22227 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Zfp42P22227 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Zfp42P22227 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Zfp42P22227 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Zfp42P22227 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Zfp42P22227 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Zfp42P22227 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Zfp42P22227 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Zfp42P22227 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.33■□□□□ 0.04
Zfp42P22227 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Zfp42P22227 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Zfp42P22227 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Zfp42P22227 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Zfp42P22227 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Zfp42P22227 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Zfp42P22227 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Zfp42P22227 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Zfp42P22227 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Zfp42P22227 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.32■□□□□ 0.04
Zfp42P22227 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Gm7862-201ENSMUST00000121461 292 ntBASIC15.32■□□□□ 0.04
Zfp42P22227 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.32■□□□□ 0.04
Zfp42P22227 Mir8098-201ENSMUST00000184011 137 ntBASIC15.32■□□□□ 0.04
Zfp42P22227 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.32■□□□□ 0.04
Zfp42P22227 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Zfp42P22227 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Zfp42P22227 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Zfp42P22227 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC15.32■□□□□ 0.04
Zfp42P22227 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Zfp42P22227 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Zfp42P22227 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Zfp42P22227 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Zfp42P22227 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.32■□□□□ 0.04
Zfp42P22227 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Zfp42P22227 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Gm7153-201ENSMUST00000117092 455 ntBASIC15.31■□□□□ 0.04
Zfp42P22227 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.31■□□□□ 0.04
Zfp42P22227 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Zfp42P22227 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.31■□□□□ 0.04
Zfp42P22227 AV026068-213ENSMUST00000223675 1171 ntBASIC15.31■□□□□ 0.04
Zfp42P22227 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.31■□□□□ 0.04
Zfp42P22227 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Zfp42P22227 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms