Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Gm15806-201ENSMUST00000120696 955 ntBASIC18.78■□□□□ 0.6
Hoxc9P09633 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC18.78■□□□□ 0.6
Hoxc9P09633 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc9P09633 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc9P09633 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc9P09633 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc9P09633 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc9P09633 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc9P09633 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc9P09633 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hoxc9P09633 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc9P09633 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hoxc9P09633 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.77■□□□□ 0.6
Hoxc9P09633 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Hoxc9P09633 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.77■□□□□ 0.6
Hoxc9P09633 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Hoxc9P09633 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Gm13829-201ENSMUST00000119600 138 ntBASIC18.77■□□□□ 0.6
Hoxc9P09633 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Hoxc9P09633 Gm6283-201ENSMUST00000182369 1000 ntBASIC18.77■□□□□ 0.6
Hoxc9P09633 Gm27701-201ENSMUST00000184498 110 ntBASIC18.77■□□□□ 0.6
Hoxc9P09633 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.77■□□□□ 0.6
Hoxc9P09633 Gm5279-201ENSMUST00000199575 745 ntBASIC18.77■□□□□ 0.6
Hoxc9P09633 Gm44719-201ENSMUST00000206404 149 ntBASIC18.77■□□□□ 0.6
Hoxc9P09633 Gm5035-201ENSMUST00000215581 927 ntBASIC18.77■□□□□ 0.6
Hoxc9P09633 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Hoxc9P09633 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hoxc9P09633 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Hoxc9P09633 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc9P09633 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc9P09633 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hoxc9P09633 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Hoxc9P09633 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.76■□□□□ 0.59
Hoxc9P09633 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC18.76■□□□□ 0.59
Hoxc9P09633 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.76■□□□□ 0.59
Hoxc9P09633 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Gm17150-201ENSMUST00000165577 381 ntBASIC18.76■□□□□ 0.59
Hoxc9P09633 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC18.76■□□□□ 0.59
Hoxc9P09633 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.76■□□□□ 0.59
Hoxc9P09633 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC18.76■□□□□ 0.59
Hoxc9P09633 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Gm42690-201ENSMUST00000197921 1836 ntBASIC18.76■□□□□ 0.59
Hoxc9P09633 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hoxc9P09633 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.75■□□□□ 0.59
Hoxc9P09633 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hoxc9P09633 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hoxc9P09633 Mir7654-201ENSMUST00000185082 70 ntBASIC18.75■□□□□ 0.59
Hoxc9P09633 Gm28911-201ENSMUST00000188837 117 ntBASIC18.75■□□□□ 0.59
Hoxc9P09633 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC18.75■□□□□ 0.59
Hoxc9P09633 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Hoxc9P09633 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hoxc9P09633 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Hoxc9P09633 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.74■□□□□ 0.59
Hoxc9P09633 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Hoxc9P09633 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Hoxc9P09633 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.74■□□□□ 0.59
Hoxc9P09633 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms