Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC21.61■■□□□ 1.05
NclP09405 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NclP09405 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC21.61■■□□□ 1.05
NclP09405 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC21.61■■□□□ 1.05
NclP09405 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NclP09405 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC21.61■■□□□ 1.05
NclP09405 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC21.61■■□□□ 1.05
NclP09405 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NclP09405 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NclP09405 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC21.6■■□□□ 1.05
NclP09405 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
NclP09405 Gm37230-201ENSMUST00000194491 818 ntBASIC21.6■■□□□ 1.05
NclP09405 Shd-206ENSMUST00000225145 998 ntBASIC21.6■■□□□ 1.05
NclP09405 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC21.6■■□□□ 1.05
NclP09405 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC21.6■■□□□ 1.05
NclP09405 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC21.6■■□□□ 1.05
NclP09405 Gm16425-201ENSMUST00000118143 3130 ntBASIC21.6■■□□□ 1.05
NclP09405 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC21.6■■□□□ 1.05
NclP09405 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NclP09405 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NclP09405 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC21.6■■□□□ 1.05
NclP09405 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NclP09405 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NclP09405 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NclP09405 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NclP09405 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NclP09405 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NclP09405 Gm6222-201ENSMUST00000120787 396 ntBASIC21.59■■□□□ 1.05
NclP09405 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
NclP09405 Gm7775-201ENSMUST00000218871 853 ntBASIC21.59■■□□□ 1.05
NclP09405 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
NclP09405 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
NclP09405 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
NclP09405 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NclP09405 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
NclP09405 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NclP09405 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
NclP09405 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NclP09405 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
NclP09405 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
NclP09405 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC21.57■■□□□ 1.04
NclP09405 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC21.57■■□□□ 1.04
NclP09405 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NclP09405 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms