Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sod1P08228 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Sod1P08228 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sod1P08228 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Sod1P08228 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sod1P08228 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sod1P08228 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sod1P08228 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sod1P08228 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sod1P08228 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sod1P08228 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sod1P08228 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Sod1P08228 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Sod1P08228 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Sod1P08228 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sod1P08228 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sod1P08228 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sod1P08228 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.6□□□□□ -0.23
Sod1P08228 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sod1P08228 Gm13829-201ENSMUST00000119600 138 ntBASIC13.6□□□□□ -0.23
Sod1P08228 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.6□□□□□ -0.23
Sod1P08228 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC13.6□□□□□ -0.23
Sod1P08228 Gm12960-201ENSMUST00000120017 1066 ntBASIC13.6□□□□□ -0.23
Sod1P08228 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Gm17150-201ENSMUST00000165577 381 ntBASIC13.6□□□□□ -0.23
Sod1P08228 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Sod1P08228 Mir7085-201ENSMUST00000184353 66 ntBASIC13.6□□□□□ -0.23
Sod1P08228 Mir7654-201ENSMUST00000185082 70 ntBASIC13.6□□□□□ -0.23
Sod1P08228 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.6□□□□□ -0.23
Sod1P08228 Gm44719-201ENSMUST00000206404 149 ntBASIC13.6□□□□□ -0.23
Sod1P08228 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sod1P08228 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.6□□□□□ -0.23
Sod1P08228 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Sod1P08228 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sod1P08228 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.59□□□□□ -0.23
Sod1P08228 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Sod1P08228 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sod1P08228 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.59□□□□□ -0.23
Sod1P08228 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.59□□□□□ -0.23
Sod1P08228 Gm9002-201ENSMUST00000178437 499 ntBASIC13.59□□□□□ -0.23
Sod1P08228 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Sod1P08228 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Gm28911-201ENSMUST00000188837 117 ntBASIC13.59□□□□□ -0.23
Sod1P08228 Gm5425-201ENSMUST00000214125 459 ntBASIC13.59□□□□□ -0.23
Sod1P08228 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Sod1P08228 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
Sod1P08228 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.59□□□□□ -0.23
Sod1P08228 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Sod1P08228 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sod1P08228 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sod1P08228 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sod1P08228 Gm8131-201ENSMUST00000213783 1570 ntBASIC13.58□□□□□ -0.23
Sod1P08228 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.58□□□□□ -0.23
Sod1P08228 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Sod1P08228 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.58□□□□□ -0.24
Sod1P08228 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Sod1P08228 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms