Protein–RNA interactions for Protein: P06323

T-cell receptor alpha chain V region CTL-F3, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06323 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.82□□□□□ -0.52
P06323 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC11.82□□□□□ -0.52
P06323 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
P06323 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.82□□□□□ -0.52
P06323 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC11.82□□□□□ -0.52
P06323 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
P06323 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.82□□□□□ -0.52
P06323 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
P06323 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
P06323 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P06323 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P06323 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
P06323 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC11.81□□□□□ -0.52
P06323 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.81□□□□□ -0.52
P06323 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC11.81□□□□□ -0.52
P06323 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.81□□□□□ -0.52
P06323 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.81□□□□□ -0.52
P06323 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.81□□□□□ -0.52
P06323 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.81□□□□□ -0.52
P06323 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC11.81□□□□□ -0.52
P06323 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.81□□□□□ -0.52
P06323 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
P06323 Gm45779-201ENSMUST00000212189 4064 ntBASIC11.81□□□□□ -0.52
P06323 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
P06323 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
P06323 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P06323 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
P06323 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.8□□□□□ -0.52
P06323 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.8□□□□□ -0.52
P06323 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P06323 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
P06323 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P06323 Gm45167-201ENSMUST00000208007 322 ntBASIC11.8□□□□□ -0.52
P06323 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.8□□□□□ -0.52
P06323 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.8□□□□□ -0.52
P06323 Gm18246-201ENSMUST00000221023 728 ntBASIC11.8□□□□□ -0.52
P06323 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
P06323 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.8□□□□□ -0.52
P06323 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
P06323 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
P06323 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
P06323 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms