Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vti1aO89116 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vti1aO89116 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.71■□□□□ 0.11
Vti1aO89116 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Vti1aO89116 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vti1aO89116 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vti1aO89116 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vti1aO89116 Gm13453-201ENSMUST00000118708 357 ntBASIC15.71■□□□□ 0.11
Vti1aO89116 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vti1aO89116 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.71■□□□□ 0.11
Vti1aO89116 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vti1aO89116 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vti1aO89116 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vti1aO89116 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vti1aO89116 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.71■□□□□ 0.11
Vti1aO89116 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vti1aO89116 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Vti1aO89116 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vti1aO89116 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.71■□□□□ 0.1
Vti1aO89116 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.7■□□□□ 0.1
Vti1aO89116 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vti1aO89116 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.7■□□□□ 0.1
Vti1aO89116 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vti1aO89116 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.7■□□□□ 0.1
Vti1aO89116 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vti1aO89116 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.7■□□□□ 0.1
Vti1aO89116 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.7■□□□□ 0.1
Vti1aO89116 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vti1aO89116 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vti1aO89116 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Vti1aO89116 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vti1aO89116 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Vti1aO89116 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vti1aO89116 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.69■□□□□ 0.1
Vti1aO89116 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Gm23547-201ENSMUST00000158210 271 ntBASIC15.69■□□□□ 0.1
Vti1aO89116 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vti1aO89116 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.69■□□□□ 0.1
Vti1aO89116 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.69■□□□□ 0.1
Vti1aO89116 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Vti1aO89116 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.69■□□□□ 0.1
Vti1aO89116 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vti1aO89116 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Vti1aO89116 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Vti1aO89116 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vti1aO89116 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Vti1aO89116 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vti1aO89116 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
Vti1aO89116 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vti1aO89116 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms