Protein–RNA interactions for Protein: O88746

Tom1, Target of Myb protein 1, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tom1O88746 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC19.03■□□□□ 0.64
Tom1O88746 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Gm12485-201ENSMUST00000119641 291 ntBASIC19.03■□□□□ 0.64
Tom1O88746 Gm12882-201ENSMUST00000121696 517 ntBASIC19.03■□□□□ 0.64
Tom1O88746 Gm13786-201ENSMUST00000122371 333 ntBASIC19.03■□□□□ 0.64
Tom1O88746 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
Tom1O88746 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC19.03■□□□□ 0.64
Tom1O88746 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Abhd11os-203ENSMUST00000222613 363 ntBASIC19.03■□□□□ 0.64
Tom1O88746 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Tom1O88746 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tom1O88746 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tom1O88746 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tom1O88746 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tom1O88746 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC19.03■□□□□ 0.64
Tom1O88746 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Tom1O88746 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.02■□□□□ 0.64
Tom1O88746 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Tom1O88746 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC19.02■□□□□ 0.64
Tom1O88746 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Gm8227-201ENSMUST00000223306 571 ntBASIC19.02■□□□□ 0.64
Tom1O88746 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC19.02■□□□□ 0.64
Tom1O88746 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tom1O88746 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tom1O88746 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tom1O88746 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tom1O88746 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tom1O88746 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tom1O88746 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tom1O88746 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tom1O88746 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Tom1O88746 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC19.01■□□□□ 0.63
Tom1O88746 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 Gm12203-201ENSMUST00000118235 598 ntBASIC19.01■□□□□ 0.63
Tom1O88746 Gm12209-201ENSMUST00000120089 596 ntBASIC19.01■□□□□ 0.63
Tom1O88746 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC19.01■□□□□ 0.63
Tom1O88746 Gm6152-201ENSMUST00000151704 340 ntBASIC19.01■□□□□ 0.63
Tom1O88746 Gm6621-201ENSMUST00000193251 772 ntBASIC19.01■□□□□ 0.63
Tom1O88746 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tom1O88746 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Gm6203-201ENSMUST00000209575 1342 ntBASIC19■□□□□ 0.63
Tom1O88746 Gm5620-201ENSMUST00000077991 1348 ntBASIC19■□□□□ 0.63
Tom1O88746 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tom1O88746 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
Tom1O88746 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tom1O88746 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC19■□□□□ 0.63
Tom1O88746 AC139350.3-201ENSMUST00000226151 420 ntBASIC19■□□□□ 0.63
Tom1O88746 AC154462.2-201ENSMUST00000227519 370 ntBASIC19■□□□□ 0.63
Tom1O88746 Gm9826-201ENSMUST00000029124 1299 ntBASIC19■□□□□ 0.63
Tom1O88746 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tom1O88746 Gm10268-201ENSMUST00000085340 555 ntBASIC19■□□□□ 0.63
Tom1O88746 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC19■□□□□ 0.63
Tom1O88746 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Tom1O88746 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19■□□□□ 0.63
Tom1O88746 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tom1O88746 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC19■□□□□ 0.63
Tom1O88746 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tom1O88746 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tom1O88746 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 111.2 ms