Protein–RNA interactions for Protein: O88632

Sema3f, Semaphorin-3F, mousemouse

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3fO88632 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sema3fO88632 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.78■□□□□ 0.28
Sema3fO88632 Gm16215-201ENSMUST00000161990 637 ntBASIC16.78■□□□□ 0.28
Sema3fO88632 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC16.78■□□□□ 0.28
Sema3fO88632 H2-Pa-201ENSMUST00000182803 626 ntBASIC16.78■□□□□ 0.28
Sema3fO88632 Gm9182-201ENSMUST00000217829 639 ntBASIC16.78■□□□□ 0.28
Sema3fO88632 Gm46209-201ENSMUST00000217912 553 ntBASIC16.78■□□□□ 0.28
Sema3fO88632 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Sema3fO88632 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Sema3fO88632 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sema3fO88632 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sema3fO88632 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sema3fO88632 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sema3fO88632 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sema3fO88632 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Sema3fO88632 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sema3fO88632 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Sema3fO88632 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Sema3fO88632 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Sema3fO88632 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Sema3fO88632 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC16.77■□□□□ 0.28
Sema3fO88632 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sema3fO88632 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Sema3fO88632 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Gm4875-201ENSMUST00000118257 786 ntBASIC16.77■□□□□ 0.28
Sema3fO88632 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Gm27838-201ENSMUST00000184829 128 ntBASIC16.77■□□□□ 0.28
Sema3fO88632 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Sema3fO88632 Gm29667-201ENSMUST00000190817 490 ntBASIC16.77■□□□□ 0.28
Sema3fO88632 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC16.77■□□□□ 0.28
Sema3fO88632 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Gm7730-201ENSMUST00000212486 454 ntBASIC16.77■□□□□ 0.28
Sema3fO88632 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.77■□□□□ 0.28
Sema3fO88632 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Sema3fO88632 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.77■□□□□ 0.27
Sema3fO88632 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.77■□□□□ 0.27
Sema3fO88632 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sema3fO88632 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sema3fO88632 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sema3fO88632 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sema3fO88632 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sema3fO88632 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Sema3fO88632 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Sema3fO88632 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Sema3fO88632 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
Sema3fO88632 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Sema3fO88632 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Sema3fO88632 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Gm44855-201ENSMUST00000205725 362 ntBASIC16.76■□□□□ 0.27
Sema3fO88632 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.76■□□□□ 0.27
Sema3fO88632 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sema3fO88632 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
Sema3fO88632 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Gm9768-201ENSMUST00000206007 2861 ntBASIC16.75■□□□□ 0.27
Sema3fO88632 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Sema3fO88632 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Sema3fO88632 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.75■□□□□ 0.27
Sema3fO88632 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Sema3fO88632 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Sema3fO88632 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms