Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.22□□□□□ -0.29
Lmx1bO88609 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lmx1bO88609 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Lmx1bO88609 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Gm7063-201ENSMUST00000186840 981 ntBASIC13.22□□□□□ -0.29
Lmx1bO88609 Gm38294-201ENSMUST00000192831 381 ntBASIC13.22□□□□□ -0.29
Lmx1bO88609 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.22□□□□□ -0.29
Lmx1bO88609 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.22□□□□□ -0.29
Lmx1bO88609 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.22□□□□□ -0.29
Lmx1bO88609 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.22□□□□□ -0.29
Lmx1bO88609 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.22□□□□□ -0.29
Lmx1bO88609 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.22□□□□□ -0.29
Lmx1bO88609 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Lmx1bO88609 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Lmx1bO88609 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Lmx1bO88609 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.21□□□□□ -0.29
Lmx1bO88609 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Lmx1bO88609 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Gm6415-201ENSMUST00000118488 348 ntBASIC13.21□□□□□ -0.29
Lmx1bO88609 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.21□□□□□ -0.29
Lmx1bO88609 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Lmx1bO88609 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Lmx1bO88609 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.21□□□□□ -0.3
Lmx1bO88609 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.21□□□□□ -0.3
Lmx1bO88609 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lmx1bO88609 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Lmx1bO88609 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Lmx1bO88609 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lmx1bO88609 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lmx1bO88609 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Lmx1bO88609 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.3
Lmx1bO88609 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lmx1bO88609 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lmx1bO88609 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lmx1bO88609 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Lmx1bO88609 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.2□□□□□ -0.3
Lmx1bO88609 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms