Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.92□□□□□ -0.18
Vti1bO88384 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Gm4899-201ENSMUST00000178708 719 ntBASIC13.92□□□□□ -0.18
Vti1bO88384 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.92□□□□□ -0.18
Vti1bO88384 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.92□□□□□ -0.18
Vti1bO88384 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.92□□□□□ -0.18
Vti1bO88384 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vti1bO88384 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vti1bO88384 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.91□□□□□ -0.18
Vti1bO88384 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vti1bO88384 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Vti1bO88384 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.91□□□□□ -0.18
Vti1bO88384 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vti1bO88384 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.91□□□□□ -0.18
Vti1bO88384 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vti1bO88384 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.91□□□□□ -0.18
Vti1bO88384 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.91□□□□□ -0.18
Vti1bO88384 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vti1bO88384 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.91□□□□□ -0.18
Vti1bO88384 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.91□□□□□ -0.18
Vti1bO88384 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.91□□□□□ -0.18
Vti1bO88384 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Vti1bO88384 Gm45293-201ENSMUST00000209754 1812 ntBASIC13.91□□□□□ -0.18
Vti1bO88384 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.91□□□□□ -0.18
Vti1bO88384 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vti1bO88384 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vti1bO88384 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vti1bO88384 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.9□□□□□ -0.18
Vti1bO88384 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vti1bO88384 Gm10499-201ENSMUST00000174094 934 ntBASIC13.9□□□□□ -0.18
Vti1bO88384 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.9□□□□□ -0.18
Vti1bO88384 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vti1bO88384 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.9□□□□□ -0.18
Vti1bO88384 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.9□□□□□ -0.18
Vti1bO88384 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vti1bO88384 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
Vti1bO88384 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Vti1bO88384 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Vti1bO88384 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Vti1bO88384 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms