Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Gm13674-201ENSMUST00000121276 823 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Gm12696-201ENSMUST00000122361 905 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Gm14713-201ENSMUST00000122362 686 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Gm16234-201ENSMUST00000124976 815 ntTSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 Gm20281-201ENSMUST00000188225 267 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 9530018H14Rik-201ENSMUST00000192253 1243 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Gm38250-202ENSMUST00000195108 462 ntTSL 3 BASIC13.13□□□□□ -0.31
Dkk1O54908 Gm42588-201ENSMUST00000200538 1297 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.13□□□□□ -0.31
Dkk1O54908 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Gm18645-202ENSMUST00000212222 760 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 AC153516.1-201ENSMUST00000217955 779 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 1700003H04Rik-201ENSMUST00000047110 1040 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Dkk1O54908 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Cxcl2-201ENSMUST00000075433 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.13□□□□□ -0.31
Dkk1O54908 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC13.13□□□□□ -0.31
Dkk1O54908 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Dkk1O54908 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.12□□□□□ -0.31
Dkk1O54908 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.12□□□□□ -0.31
Dkk1O54908 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.12□□□□□ -0.31
Dkk1O54908 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Dkk1O54908 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm5725-201ENSMUST00000105195 924 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Dkk1O54908 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm13339-201ENSMUST00000120651 510 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 Gm14603-201ENSMUST00000121275 448 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm8653-201ENSMUST00000163096 924 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Dkk1O54908 Vmn1r129-201ENSMUST00000165961 924 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Dkk1O54908 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm8720-201ENSMUST00000168392 924 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm6164-201ENSMUST00000169774 924 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm22698-201ENSMUST00000175375 108 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Dkk1O54908 Gm37458-201ENSMUST00000194055 410 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.12□□□□□ -0.31
Dkk1O54908 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 AC159293.2-201ENSMUST00000222289 424 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 AC132881.1-201ENSMUST00000223780 1062 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 AC124729.1-202ENSMUST00000225587 938 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Dkk1O54908 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Dkk1O54908 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Dkk1O54908 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.12□□□□□ -0.31
Dkk1O54908 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Dkk1O54908 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Dkk1O54908 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms