Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc1a6O35544 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Slc1a6O35544 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Slc1a6O35544 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Slc1a6O35544 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Slc1a6O35544 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Slc1a6O35544 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Gm14042-201ENSMUST00000120139 833 ntBASIC14.37□□□□□ -0.11
Slc1a6O35544 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Slc1a6O35544 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Slc1a6O35544 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.37□□□□□ -0.11
Slc1a6O35544 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Slc1a6O35544 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.37□□□□□ -0.11
Slc1a6O35544 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Slc1a6O35544 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Slc1a6O35544 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Slc1a6O35544 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Slc1a6O35544 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Slc1a6O35544 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slc1a6O35544 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.36□□□□□ -0.11
Slc1a6O35544 Gm11764-201ENSMUST00000120221 623 ntBASIC14.36□□□□□ -0.11
Slc1a6O35544 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.36□□□□□ -0.11
Slc1a6O35544 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.36□□□□□ -0.11
Slc1a6O35544 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.36□□□□□ -0.11
Slc1a6O35544 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slc1a6O35544 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.36□□□□□ -0.11
Slc1a6O35544 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.36□□□□□ -0.11
Slc1a6O35544 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Slc1a6O35544 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Slc1a6O35544 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Slc1a6O35544 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Slc1a6O35544 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Slc1a6O35544 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Gm18246-201ENSMUST00000221023 728 ntBASIC14.35□□□□□ -0.11
Slc1a6O35544 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Slc1a6O35544 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Slc1a6O35544 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms