Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Efnb3O35393 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Efnb3O35393 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Efnb3O35393 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.54□□□□□ -0.56
Efnb3O35393 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Efnb3O35393 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Efnb3O35393 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Efnb3O35393 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.53□□□□□ -0.56
Efnb3O35393 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Efnb3O35393 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Efnb3O35393 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Efnb3O35393 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.53□□□□□ -0.56
Efnb3O35393 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.53□□□□□ -0.56
Efnb3O35393 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Efnb3O35393 Gm7935-201ENSMUST00000100555 1278 ntBASIC11.53□□□□□ -0.56
Efnb3O35393 Gm7153-201ENSMUST00000117092 455 ntBASIC11.53□□□□□ -0.56
Efnb3O35393 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Efnb3O35393 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.53□□□□□ -0.56
Efnb3O35393 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.53□□□□□ -0.56
Efnb3O35393 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.53□□□□□ -0.56
Efnb3O35393 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Efnb3O35393 Birc2-201ENSMUST00000054878 378 ntBASIC11.53□□□□□ -0.56
Efnb3O35393 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Efnb3O35393 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Efnb3O35393 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.52□□□□□ -0.56
Efnb3O35393 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Efnb3O35393 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.52□□□□□ -0.56
Efnb3O35393 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Efnb3O35393 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Efnb3O35393 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Efnb3O35393 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Efnb3O35393 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Efnb3O35393 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Efnb3O35393 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Efnb3O35393 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.52□□□□□ -0.57
Efnb3O35393 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Efnb3O35393 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.52□□□□□ -0.57
Efnb3O35393 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Umpk-ps-201ENSMUST00000211897 827 ntBASIC11.52□□□□□ -0.57
Efnb3O35393 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Efnb3O35393 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Efnb3O35393 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Efnb3O35393 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Efnb3O35393 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.52□□□□□ -0.57
Efnb3O35393 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Efnb3O35393 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.52□□□□□ -0.57
Efnb3O35393 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Efnb3O35393 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.51□□□□□ -0.57
Efnb3O35393 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Efnb3O35393 Ssr1-204ENSMUST00000225319 1610 ntBASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms