Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf2O35218 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Cpsf2O35218 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.62■□□□□ 0.09
Cpsf2O35218 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Cpsf2O35218 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cpsf2O35218 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Gm13036-201ENSMUST00000117799 748 ntBASIC15.61■□□□□ 0.09
Cpsf2O35218 Gm13884-201ENSMUST00000118103 829 ntBASIC15.61■□□□□ 0.09
Cpsf2O35218 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC15.61■□□□□ 0.09
Cpsf2O35218 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Cpsf2O35218 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cpsf2O35218 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.61■□□□□ 0.09
Cpsf2O35218 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cpsf2O35218 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.61■□□□□ 0.09
Cpsf2O35218 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Cpsf2O35218 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Cpsf2O35218 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Cpsf2O35218 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Cpsf2O35218 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Cpsf2O35218 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.6■□□□□ 0.09
Cpsf2O35218 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.6■□□□□ 0.09
Cpsf2O35218 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.6■□□□□ 0.09
Cpsf2O35218 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.6■□□□□ 0.09
Cpsf2O35218 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Gm15590-201ENSMUST00000078419 552 ntBASIC15.6■□□□□ 0.09
Cpsf2O35218 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.6■□□□□ 0.09
Cpsf2O35218 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.6■□□□□ 0.09
Cpsf2O35218 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.6■□□□□ 0.09
Cpsf2O35218 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Cpsf2O35218 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Cpsf2O35218 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.59■□□□□ 0.09
Cpsf2O35218 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.59■□□□□ 0.09
Cpsf2O35218 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Cpsf2O35218 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC15.59■□□□□ 0.09
Cpsf2O35218 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.59■□□□□ 0.09
Cpsf2O35218 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.59■□□□□ 0.09
Cpsf2O35218 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC15.59■□□□□ 0.09
Cpsf2O35218 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.59■□□□□ 0.09
Cpsf2O35218 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Cpsf2O35218 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf2O35218 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Cpsf2O35218 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms