Protein–RNA interactions for Protein: O08603

Raet1b, Retinoic acid early-inducible protein 1-beta, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1bO08603 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.93□□□□□ -0.34
Raet1bO08603 Gm15467-201ENSMUST00000120582 445 ntBASIC12.93□□□□□ -0.34
Raet1bO08603 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1bO08603 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Raet1bO08603 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1bO08603 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1bO08603 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1bO08603 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1bO08603 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Raet1bO08603 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.92□□□□□ -0.34
Raet1bO08603 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
Raet1bO08603 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Raet1bO08603 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.92□□□□□ -0.34
Raet1bO08603 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.92□□□□□ -0.34
Raet1bO08603 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.92□□□□□ -0.34
Raet1bO08603 Gm14494-201ENSMUST00000118786 435 ntBASIC12.92□□□□□ -0.34
Raet1bO08603 Gm17271-201ENSMUST00000165535 355 ntBASIC12.92□□□□□ -0.34
Raet1bO08603 Rpph1-201ENSMUST00000175096 319 ntBASIC12.92□□□□□ -0.34
Raet1bO08603 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.92□□□□□ -0.34
Raet1bO08603 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Raet1bO08603 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
Raet1bO08603 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Raet1bO08603 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.91□□□□□ -0.34
Raet1bO08603 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Raet1bO08603 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.91□□□□□ -0.34
Raet1bO08603 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.91□□□□□ -0.34
Raet1bO08603 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.91□□□□□ -0.34
Raet1bO08603 Gm15483-201ENSMUST00000120338 456 ntBASIC12.91□□□□□ -0.34
Raet1bO08603 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC12.91□□□□□ -0.34
Raet1bO08603 Gm27525-201ENSMUST00000184465 107 ntBASIC12.91□□□□□ -0.34
Raet1bO08603 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Gm6443-201ENSMUST00000203599 874 ntBASIC12.91□□□□□ -0.34
Raet1bO08603 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.91□□□□□ -0.34
Raet1bO08603 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.91□□□□□ -0.34
Raet1bO08603 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC12.91□□□□□ -0.34
Raet1bO08603 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Raet1bO08603 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Raet1bO08603 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.9□□□□□ -0.34
Raet1bO08603 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.9□□□□□ -0.34
Raet1bO08603 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.9□□□□□ -0.34
Raet1bO08603 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Raet1bO08603 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms