Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Mir692-1-201ENSMUST00000102263 109 ntBASIC26.18■■□□□ 1.78
Ccdc180J3QNE4 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC26.18■■□□□ 1.78
Ccdc180J3QNE4 Gm37714-201ENSMUST00000194742 342 ntBASIC26.18■■□□□ 1.78
Ccdc180J3QNE4 Gm18905-201ENSMUST00000205454 928 ntBASIC26.18■■□□□ 1.78
Ccdc180J3QNE4 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC26.18■■□□□ 1.78
Ccdc180J3QNE4 AC139350.3-201ENSMUST00000226151 420 ntBASIC26.18■■□□□ 1.78
Ccdc180J3QNE4 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ccdc180J3QNE4 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ccdc180J3QNE4 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ccdc180J3QNE4 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Gm9200-201ENSMUST00000118513 1354 ntBASIC26.17■■□□□ 1.78
Ccdc180J3QNE4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Gm43352-201ENSMUST00000196419 3065 ntBASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ccdc180J3QNE4 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Gm27839-201ENSMUST00000184242 106 ntBASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Gm7446-201ENSMUST00000221035 1240 ntBASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Gm8598-201ENSMUST00000221184 836 ntBASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Gm43598-201ENSMUST00000202482 2479 ntBASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Ccdc180J3QNE4 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Gm11425-201ENSMUST00000119608 498 ntBASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Gm14660-201ENSMUST00000119809 575 ntBASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Gm6983-201ENSMUST00000214912 628 ntBASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Gm9396-201ENSMUST00000076703 567 ntBASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
Ccdc180J3QNE4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ccdc180J3QNE4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Ccdc180J3QNE4 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ccdc180J3QNE4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ccdc180J3QNE4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
Ccdc180J3QNE4 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
Ccdc180J3QNE4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC26.14■■□□□ 1.77
Ccdc180J3QNE4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC26.14■■□□□ 1.77
Ccdc180J3QNE4 Gm8775-201ENSMUST00000170943 1327 ntBASIC26.13■■□□□ 1.77
Ccdc180J3QNE4 Gm12416-201ENSMUST00000120911 1008 ntBASIC26.13■■□□□ 1.77
Ccdc180J3QNE4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ccdc180J3QNE4 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Ccdc180J3QNE4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms