Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.48■□□□□ 0.39
NpcdF8VQB8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Gm13226-201ENSMUST00000117838 404 ntBASIC17.48■□□□□ 0.39
NpcdF8VQB8 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NpcdF8VQB8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Gm15198-201ENSMUST00000117283 177 ntBASIC17.47■□□□□ 0.39
NpcdF8VQB8 Gm12585-201ENSMUST00000117307 290 ntBASIC17.47■□□□□ 0.39
NpcdF8VQB8 Gm15678-201ENSMUST00000117573 960 ntBASIC17.47■□□□□ 0.39
NpcdF8VQB8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Gm17420-201ENSMUST00000164753 153 ntBASIC17.47■□□□□ 0.39
NpcdF8VQB8 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NpcdF8VQB8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Gm12341-201ENSMUST00000119724 503 ntBASIC17.46■□□□□ 0.39
NpcdF8VQB8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.46■□□□□ 0.39
NpcdF8VQB8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 AC159896.2-201ENSMUST00000214753 269 ntBASIC17.46■□□□□ 0.39
NpcdF8VQB8 AC154319.1-201ENSMUST00000216330 312 ntBASIC17.46■□□□□ 0.39
NpcdF8VQB8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 AL589735.1-201ENSMUST00000224353 270 ntBASIC17.46■□□□□ 0.39
NpcdF8VQB8 AC149588.3-201ENSMUST00000227515 150 ntBASIC17.46■□□□□ 0.39
NpcdF8VQB8 Gm8399-201ENSMUST00000082300 1117 ntBASIC17.46■□□□□ 0.39
NpcdF8VQB8 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NpcdF8VQB8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NpcdF8VQB8 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
NpcdF8VQB8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
NpcdF8VQB8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Mir1894-201ENSMUST00000122802 81 ntBASIC17.45■□□□□ 0.38
NpcdF8VQB8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Mir3102-201ENSMUST00000175555 104 ntBASIC17.45■□□□□ 0.38
NpcdF8VQB8 Mir7654-201ENSMUST00000185082 70 ntBASIC17.45■□□□□ 0.38
NpcdF8VQB8 Gm37424-201ENSMUST00000191727 561 ntBASIC17.45■□□□□ 0.38
NpcdF8VQB8 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NpcdF8VQB8 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms