Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Gm6973-201ENSMUST00000117080 721 ntBASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Pcdh11xF6ZNL5 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdh11xF6ZNL5 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh11xF6ZNL5 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.17
Pcdh11xF6ZNL5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh11xF6ZNL5 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
Pcdh11xF6ZNL5 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh11xF6ZNL5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh11xF6ZNL5 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh11xF6ZNL5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh11xF6ZNL5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdh11xF6ZNL5 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Gm15920-201ENSMUST00000118998 402 ntBASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Gm8396-201ENSMUST00000057361 823 ntBASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdh11xF6ZNL5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdh11xF6ZNL5 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms