Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Proscos-202ENSMUST00000178990 666 ntBASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.57□□□□□ -0.08
Ccdc188F6WEU2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Gm26464-201ENSMUST00000157094 305 ntBASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Mir5120-201ENSMUST00000175020 78 ntBASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Gm6621-201ENSMUST00000193251 772 ntBASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ccdc188F6WEU2 Gm19439-201ENSMUST00000198195 2273 ntBASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Gm18905-201ENSMUST00000205454 928 ntBASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Gm6203-201ENSMUST00000209575 1342 ntBASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ccdc188F6WEU2 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc188F6WEU2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc188F6WEU2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc188F6WEU2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc188F6WEU2 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ccdc188F6WEU2 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc188F6WEU2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ccdc188F6WEU2 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ccdc188F6WEU2 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms