Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cpsf4lE9Q2N0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Gm4081-201ENSMUST00000195287 1838 ntBASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Mir6990-201ENSMUST00000183724 91 ntBASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Gm44335-201ENSMUST00000196879 141 ntBASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Gm44297-201ENSMUST00000198304 141 ntBASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Gm44346-201ENSMUST00000198851 141 ntBASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.34□□□□□ -0.43
Cpsf4lE9Q2N0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cpsf4lE9Q2N0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.43
Cpsf4lE9Q2N0 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.33□□□□□ -0.43
Cpsf4lE9Q2N0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm23935-201ENSMUST00000102303 57 ntBASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm24270-201ENSMUST00000102326 57 ntBASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm24245-201ENSMUST00000157318 57 ntBASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm38225-201ENSMUST00000194001 393 ntBASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm43575-201ENSMUST00000196420 516 ntBASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.33□□□□□ -0.44
Cpsf4lE9Q2N0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cpsf4lE9Q2N0 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms