Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm5879-201ENSMUST00000089501 1209 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm25951-201ENSMUST00000175330 64 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm8862-201ENSMUST00000198379 1346 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm13570-201ENSMUST00000140763 309 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm25261-201ENSMUST00000157416 134 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Col6a3E9PWQ3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Gm14208-201ENSMUST00000119645 678 ntBASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col6a3E9PWQ3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 App-207ENSMUST00000227737 2827 ntBASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Gm43094-201ENSMUST00000196549 921 ntBASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Col6a3E9PWQ3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Gm11964-201ENSMUST00000120982 444 ntBASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Gm6152-201ENSMUST00000151704 340 ntBASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col6a3E9PWQ3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms