Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.05□□□□□ -0.32
Shank1D3YZU1 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Gm5035-201ENSMUST00000215581 927 ntBASIC13.05□□□□□ -0.32
Shank1D3YZU1 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.05□□□□□ -0.32
Shank1D3YZU1 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.05□□□□□ -0.32
Shank1D3YZU1 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Shank1D3YZU1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.04□□□□□ -0.32
Shank1D3YZU1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.04□□□□□ -0.32
Shank1D3YZU1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.04□□□□□ -0.32
Shank1D3YZU1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Gm46209-201ENSMUST00000217912 553 ntBASIC13.04□□□□□ -0.32
Shank1D3YZU1 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.04□□□□□ -0.32
Shank1D3YZU1 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.04□□□□□ -0.32
Shank1D3YZU1 Gm6222-201ENSMUST00000120787 396 ntBASIC13.04□□□□□ -0.32
Shank1D3YZU1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Shank1D3YZU1 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Gm37917-201ENSMUST00000194711 392 ntBASIC13.03□□□□□ -0.32
Shank1D3YZU1 AC162801.1-201ENSMUST00000220612 198 ntBASIC13.03□□□□□ -0.32
Shank1D3YZU1 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Shank1D3YZU1 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shank1D3YZU1 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shank1D3YZU1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shank1D3YZU1 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Shank1D3YZU1 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shank1D3YZU1 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shank1D3YZU1 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Shank1D3YZU1 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shank1D3YZU1 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Shank1D3YZU1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms