Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.15□□□□□ -0.14
Clip3B9EHT4 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Gm44335-201ENSMUST00000196879 141 ntBASIC14.15□□□□□ -0.14
Clip3B9EHT4 Gm44297-201ENSMUST00000198304 141 ntBASIC14.15□□□□□ -0.14
Clip3B9EHT4 Gm44346-201ENSMUST00000198851 141 ntBASIC14.15□□□□□ -0.14
Clip3B9EHT4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Clip3B9EHT4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
Clip3B9EHT4 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Clip3B9EHT4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Rprl2-201ENSMUST00000157150 290 ntBASIC14.14□□□□□ -0.15
Clip3B9EHT4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.14□□□□□ -0.15
Clip3B9EHT4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Clip3B9EHT4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Clip3B9EHT4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.12□□□□□ -0.15
Clip3B9EHT4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.12□□□□□ -0.15
Clip3B9EHT4 Gm45612-201ENSMUST00000211320 160 ntBASIC14.12□□□□□ -0.15
Clip3B9EHT4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms