Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Mir1938-201ENSMUST00000158746 100 ntBASIC18.46■□□□□ 0.55
Scn7aB1AYL1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Gm9816-201ENSMUST00000122292 1414 ntBASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Scn7aB1AYL1 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Gm13392-201ENSMUST00000117708 150 ntBASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Gm6152-201ENSMUST00000151704 340 ntBASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Gm7287-201ENSMUST00000205267 602 ntBASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 AC131690.1-201ENSMUST00000218406 374 ntBASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Gm44645-201ENSMUST00000205492 1653 ntBASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Scn7aB1AYL1 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Gm11557-201ENSMUST00000120200 1008 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Gm8584-201ENSMUST00000171982 758 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Gm24420-201ENSMUST00000176676 59 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Gm8927-201ENSMUST00000181978 981 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Gm3222-201ENSMUST00000071282 990 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 AC126549.2-201ENSMUST00000223997 1976 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Gm44799-201ENSMUST00000207639 1202 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Scn7aB1AYL1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Gm24644-201ENSMUST00000157114 139 ntBASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Gm18473-201ENSMUST00000220543 868 ntBASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Scn7aB1AYL1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Gm12957-201ENSMUST00000117835 377 ntBASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Scn7aB1AYL1 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms