Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Col6a5A6H584 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.88□□□□□ -0.67
Col6a5A6H584 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Col6a5A6H584 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Gm21038-201ENSMUST00000222205 1383 ntBASIC10.88□□□□□ -0.67
Col6a5A6H584 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
Col6a5A6H584 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Gm6023-201ENSMUST00000118217 606 ntBASIC10.88□□□□□ -0.67
Col6a5A6H584 Gm13689-201ENSMUST00000119360 685 ntBASIC10.88□□□□□ -0.67
Col6a5A6H584 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC10.88□□□□□ -0.67
Col6a5A6H584 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC10.88□□□□□ -0.67
Col6a5A6H584 AC123645.1-201ENSMUST00000228469 605 ntBASIC10.88□□□□□ -0.67
Col6a5A6H584 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Col6a5A6H584 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Col6a5A6H584 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Gm15460-201ENSMUST00000118147 391 ntBASIC10.87□□□□□ -0.67
Col6a5A6H584 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC10.87□□□□□ -0.67
Col6a5A6H584 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC10.87□□□□□ -0.67
Col6a5A6H584 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Gm18893-201ENSMUST00000198416 943 ntBASIC10.87□□□□□ -0.67
Col6a5A6H584 Gm6916-202ENSMUST00000205523 195 ntBASIC10.87□□□□□ -0.67
Col6a5A6H584 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Gm44832-201ENSMUST00000208849 2303 ntBASIC10.87□□□□□ -0.67
Col6a5A6H584 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC10.87□□□□□ -0.67
Col6a5A6H584 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Gm15240-201ENSMUST00000118156 720 ntBASIC10.87□□□□□ -0.67
Col6a5A6H584 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Col6a5A6H584 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.87□□□□□ -0.67
Col6a5A6H584 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Col6a5A6H584 Gm8099-201ENSMUST00000200510 742 ntBASIC10.87□□□□□ -0.67
Col6a5A6H584 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Col6a5A6H584 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a5A6H584 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Col6a5A6H584 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a5A6H584 Gm38037-201ENSMUST00000192600 1624 ntBASIC10.86□□□□□ -0.67
Col6a5A6H584 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a5A6H584 Gm26927-201ENSMUST00000182385 965 ntBASIC10.86□□□□□ -0.67
Col6a5A6H584 Gm18473-201ENSMUST00000220543 868 ntBASIC10.86□□□□□ -0.67
Col6a5A6H584 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.86□□□□□ -0.67
Col6a5A6H584 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.86□□□□□ -0.67
Col6a5A6H584 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Gm45412-201ENSMUST00000210217 2275 ntBASIC10.86□□□□□ -0.67
Col6a5A6H584 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC10.86□□□□□ -0.67
Col6a5A6H584 AC121598.2-201ENSMUST00000228376 2325 ntBASIC10.86□□□□□ -0.67
Col6a5A6H584 Sybu-209ENSMUST00000228639 4113 ntBASIC10.86□□□□□ -0.67
Col6a5A6H584 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Col6a5A6H584 Gm8566-201ENSMUST00000120174 465 ntBASIC10.86□□□□□ -0.67
Col6a5A6H584 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms