Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav12-1A0N8R1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Gm7862-201ENSMUST00000121461 292 ntBASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Olfr286-202ENSMUST00000205305 969 ntBASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 AV026068-213ENSMUST00000223675 1171 ntBASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav12-1A0N8R1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Gm2272-201ENSMUST00000194903 582 ntBASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Gm2451-201ENSMUST00000199447 999 ntBASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Gm10290-201ENSMUST00000200451 999 ntBASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav12-1A0N8R1 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms