Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Gm13453-201ENSMUST00000118708 357 ntBASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cfap99A0A140LIX9 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Gm11424-201ENSMUST00000121929 829 ntBASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cfap99A0A140LIX9 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Mir7684-201ENSMUST00000183858 60 ntBASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cfap99A0A140LIX9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cfap99A0A140LIX9 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms