Protein–RNA interactions for Protein: A0A0G2JGN3

Ighv1-78, Immunoglobulin heavy variable 1-78 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-78A0A0G2JGN3 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gm37230-201ENSMUST00000194491 818 ntBASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-78A0A0G2JGN3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ighv1-78A0A0G2JGN3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Ighv1-78A0A0G2JGN3 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms