Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 AC126250.1-201ENSMUST00000228343 1768 ntBASIC10.6□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm2272-201ENSMUST00000194903 582 ntBASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm9385-201ENSMUST00000117563 472 ntBASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gpr146-202ENSMUST00000053120 1040 ntBASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav13n-1A0A0G2JEU8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms