Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm37297-201ENSMUST00000192974 2384 ntBASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm8096-201ENSMUST00000209921 1591 ntBASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm1401-201ENSMUST00000122048 772 ntBASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm12134-201ENSMUST00000122109 520 ntBASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm12260-201ENSMUST00000122447 411 ntBASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gm8597-201ENSMUST00000191525 1109 ntBASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Thap2-203ENSMUST00000218989 527 ntBASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Trav9n-2A0A0G2JDP3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms