Protein–RNA interactions for Protein: A0A0A6YWI9

Ighv1-11, Immunoglobulin heavy variable V1-11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-11A0A0A6YWI9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm11764-201ENSMUST00000120221 623 ntBASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm17971-201ENSMUST00000190239 806 ntBASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 AC166574.6-201ENSMUST00000227889 1806 ntBASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Ighv1-11A0A0A6YWI9 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm6550-201ENSMUST00000187574 993 ntBASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm28659-201ENSMUST00000188013 759 ntBASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm10819-201ENSMUST00000099988 561 ntBASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Ighv1-11A0A0A6YWI9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms