Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-4A0A075B6C1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav7-4A0A075B6C1 Gm29361-201ENSMUST00000183323 2000 ntBASIC11.11□□□□□ -0.63
Trav7-4A0A075B6C1 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-4A0A075B6C1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav7-4A0A075B6C1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav7-4A0A075B6C1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-4A0A075B6C1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav7-4A0A075B6C1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Gm11355-201ENSMUST00000121120 306 ntBASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Trav7-4A0A075B6C1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Gm5417-201ENSMUST00000079706 384 ntBASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav7-4A0A075B6C1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms