Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-5A0A075B6B9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6d-5A0A075B6B9 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm8584-201ENSMUST00000171982 758 ntBASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav6d-5A0A075B6B9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms