Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav6n-6A0A075B6B2 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm42872-201ENSMUST00000200026 1967 ntBASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Gm18195-201ENSMUST00000207604 706 ntBASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 AC154757.1-201ENSMUST00000228289 336 ntBASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.66
Trav6n-6A0A075B6B2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC10.9□□□□□ -0.67
Trav6n-6A0A075B6B2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav6n-6A0A075B6B2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav6n-6A0A075B6B2 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Trav6n-6A0A075B6B2 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav6n-6A0A075B6B2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav6n-6A0A075B6B2 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Trav6n-6A0A075B6B2 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Trav6n-6A0A075B6B2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm4535-201ENSMUST00000182274 558 ntBASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm6376-201ENSMUST00000209407 580 ntBASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm19164-201ENSMUST00000210667 640 ntBASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm10355-201ENSMUST00000097146 517 ntBASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm18244-201ENSMUST00000219747 1566 ntBASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav6n-6A0A075B6B2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms