Protein–RNA interactions for Protein: V9GX31

Gm12728, Peptidyl-prolyl cis-trans isomerase, mousemouse

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12728V9GX31 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12728V9GX31 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Gm12728V9GX31 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Gm4535-201ENSMUST00000182274 558 ntBASIC11.74□□□□□ -0.53
Gm12728V9GX31 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.74□□□□□ -0.53
Gm12728V9GX31 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Gm10355-201ENSMUST00000097146 517 ntBASIC11.74□□□□□ -0.53
Gm12728V9GX31 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Gm12728V9GX31 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Gm13418-201ENSMUST00000119097 944 ntBASIC11.73□□□□□ -0.53
Gm12728V9GX31 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.73□□□□□ -0.53
Gm12728V9GX31 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.73□□□□□ -0.53
Gm12728V9GX31 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.73□□□□□ -0.53
Gm12728V9GX31 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.73□□□□□ -0.53
Gm12728V9GX31 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.72□□□□□ -0.53
Gm12728V9GX31 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms