Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afb2S4R1M3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afb2S4R1M3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Gm15427-201ENSMUST00000117288 531 ntBASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Rpph1-201ENSMUST00000175096 319 ntBASIC14.59□□□□□ -0.07
H2afb2S4R1M3 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Gm9182-201ENSMUST00000217829 639 ntBASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.59□□□□□ -0.07
H2afb2S4R1M3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.58□□□□□ -0.07
H2afb2S4R1M3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
H2afb2S4R1M3 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
H2afb2S4R1M3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Gm11779-201ENSMUST00000118541 368 ntBASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Gm15467-201ENSMUST00000120582 445 ntBASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Gm17271-201ENSMUST00000165535 355 ntBASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Gm6443-201ENSMUST00000203599 874 ntBASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
H2afb2S4R1M3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms