Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
ClcnkaQ9WUB7 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Gm45747-201ENSMUST00000212203 999 ntBASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
ClcnkaQ9WUB7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
ClcnkaQ9WUB7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClcnkaQ9WUB7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.46□□□□□ -0.26
ClcnkaQ9WUB7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClcnkaQ9WUB7 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClcnkaQ9WUB7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClcnkaQ9WUB7 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClcnkaQ9WUB7 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClcnkaQ9WUB7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
ClcnkaQ9WUB7 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Mir3113-201ENSMUST00000175478 76 ntBASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
ClcnkaQ9WUB7 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Gm14494-201ENSMUST00000118786 435 ntBASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Gm27301-201ENSMUST00000184012 127 ntBASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Gm8000-201ENSMUST00000188378 592 ntBASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Gm44492-201ENSMUST00000197012 141 ntBASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
ClcnkaQ9WUB7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms