Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Mir433-201ENSMUST00000093564 124 ntBASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm12997-201ENSMUST00000120207 640 ntBASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm13786-201ENSMUST00000122371 333 ntBASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm17376-201ENSMUST00000166016 84 ntBASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a4Q9QZR9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm13859-201ENSMUST00000119936 1423 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm24420-201ENSMUST00000176676 59 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm8927-201ENSMUST00000181978 981 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm26927-201ENSMUST00000182385 965 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm9124-201ENSMUST00000191789 1092 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm9113-201ENSMUST00000192510 1018 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm9131-201ENSMUST00000193557 1089 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm9121-201ENSMUST00000193749 1071 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm5363-201ENSMUST00000211927 938 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm3222-201ENSMUST00000071282 990 ntBASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a4Q9QZR9 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Gm6621-201ENSMUST00000193251 772 ntBASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Gm42627-201ENSMUST00000197347 224 ntBASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Gm9445-201ENSMUST00000207454 1285 ntBASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Gm9368-201ENSMUST00000219348 831 ntBASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a4Q9QZR9 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms