Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smco4Q9JIS3 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Smco4Q9JIS3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Gm8242-201ENSMUST00000193029 1420 ntBASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Gm18666-201ENSMUST00000190039 958 ntBASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Gm44450-201ENSMUST00000199528 114 ntBASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.72□□□□□ -0.53
Smco4Q9JIS3 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.72□□□□□ -0.53
Smco4Q9JIS3 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Gm38027-201ENSMUST00000192315 235 ntBASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Smco4Q9JIS3 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Smco4Q9JIS3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms