Protein–RNA interactions for Protein: Q9JIL2

Ccl28, C-C motif chemokine 28, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl28Q9JIL2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Gm13884-201ENSMUST00000118103 829 ntBASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Gm10060-201ENSMUST00000212002 111 ntBASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccl28Q9JIL2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Gm44645-201ENSMUST00000205492 1653 ntBASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccl28Q9JIL2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Gm6184-201ENSMUST00000120403 1261 ntBASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.79□□□□□ -0.52
Ccl28Q9JIL2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms