Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Gm37230-201ENSMUST00000194491 818 ntBASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Gm17968-201ENSMUST00000194902 784 ntBASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Gm45747-201ENSMUST00000212203 999 ntBASIC15.41■□□□□ 0.06
Nup50Q9JIH2 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.41■□□□□ 0.06
Nup50Q9JIH2 AC159295.1-201ENSMUST00000225326 940 ntBASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Nup50Q9JIH2 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Gm27301-201ENSMUST00000184012 127 ntBASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nup50Q9JIH2 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Gm14140-201ENSMUST00000119999 995 ntBASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nup50Q9JIH2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.38■□□□□ 0.05
Nup50Q9JIH2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.38■□□□□ 0.05
Nup50Q9JIH2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup50Q9JIH2 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup50Q9JIH2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Nup50Q9JIH2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup50Q9JIH2 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nup50Q9JIH2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nup50Q9JIH2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms