Protein–RNA interactions for Protein: Q9JI38

Pus3, tRNA pseudouridine(38/39) synthase, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pus3Q9JI38 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pus3Q9JI38 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pus3Q9JI38 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pus3Q9JI38 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm29310-201ENSMUST00000185468 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21825-201ENSMUST00000185728 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm29109-201ENSMUST00000185895 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21896-201ENSMUST00000186520 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21873-201ENSMUST00000186728 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21794-201ENSMUST00000187056 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21880-201ENSMUST00000187275 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21826-201ENSMUST00000187451 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21198-201ENSMUST00000188393 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21749-201ENSMUST00000189343 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21901-201ENSMUST00000189568 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm29424-201ENSMUST00000189716 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm28599-201ENSMUST00000189838 694 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21867-201ENSMUST00000189917 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm29269-201ENSMUST00000190087 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21722-201ENSMUST00000190153 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm28423-201ENSMUST00000190701 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21899-201ENSMUST00000190745 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21910-201ENSMUST00000191163 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21849-201ENSMUST00000191571 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm28678-201ENSMUST00000191593 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm20910-201ENSMUST00000193268 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Gm21871-201ENSMUST00000194621 696 ntBASIC17.3■□□□□ 0.36
Pus3Q9JI38 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pus3Q9JI38 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Gm9252-201ENSMUST00000172364 1602 ntBASIC17.29■□□□□ 0.36
Pus3Q9JI38 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Gm28630-201ENSMUST00000187806 498 ntBASIC17.29■□□□□ 0.36
Pus3Q9JI38 Gm9182-201ENSMUST00000217829 639 ntBASIC17.29■□□□□ 0.36
Pus3Q9JI38 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.29■□□□□ 0.36
Pus3Q9JI38 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.29■□□□□ 0.36
Pus3Q9JI38 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.29■□□□□ 0.36
Pus3Q9JI38 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.29■□□□□ 0.36
Pus3Q9JI38 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Gm13223-201ENSMUST00000118609 747 ntBASIC17.28■□□□□ 0.36
Pus3Q9JI38 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pus3Q9JI38 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms