Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-4Q9EQM3 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 AC121598.1-201ENSMUST00000228224 1019 ntBASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.89□□□□□ -0.03
Nkx2-4Q9EQM3 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 App-207ENSMUST00000227737 2827 ntBASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Dancr-204ENSMUST00000132389 2347 ntBASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Gm27572-201ENSMUST00000183702 255 ntBASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-4Q9EQM3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Gm9726-201ENSMUST00000180321 678 ntBASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-4Q9EQM3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-4Q9EQM3 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms