Protein–RNA interactions for Protein: Q9DCN7

Rnft1, E3 ubiquitin-protein ligase RNFT1, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1Q9DCN7 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Rnft1Q9DCN7 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rnft1Q9DCN7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Gm8749-201ENSMUST00000117737 331 ntBASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rnft1Q9DCN7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rnft1Q9DCN7 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Gm13464-201ENSMUST00000119418 935 ntBASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rnft1Q9DCN7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms