Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Rrp8Q9DB85 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rrp8Q9DB85 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Gm8749-201ENSMUST00000117737 331 ntBASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Gm15823-201ENSMUST00000064305 670 ntBASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Rrp8Q9DB85 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Rrp8Q9DB85 Gm22189-201ENSMUST00000103822 86 ntBASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 59.3 ms